Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.3■□□□□ 0.52
SRFP11831 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRFP11831 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SRFP11831 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.3■□□□□ 0.52
SRFP11831 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.3■□□□□ 0.52
SRFP11831 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRFP11831 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SRFP11831 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.29■□□□□ 0.52
SRFP11831 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SRFP11831 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SRFP11831 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.29■□□□□ 0.52
SRFP11831 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.29■□□□□ 0.52
SRFP11831 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SRFP11831 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SRFP11831 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
SRFP11831 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.29■□□□□ 0.52
SRFP11831 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.29■□□□□ 0.52
SRFP11831 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SRFP11831 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.29■□□□□ 0.52
SRFP11831 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.29■□□□□ 0.52
SRFP11831 C20orf181-201ENST00000623918 480 ntBASIC18.29■□□□□ 0.52
SRFP11831 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.29■□□□□ 0.52
SRFP11831 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.29■□□□□ 0.52
SRFP11831 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.29■□□□□ 0.52
SRFP11831 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.29■□□□□ 0.52
SRFP11831 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SRFP11831 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRFP11831 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRFP11831 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRFP11831 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRFP11831 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRFP11831 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 CRYGEP-201ENST00000412192 528 ntBASIC18.28■□□□□ 0.52
SRFP11831 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.28■□□□□ 0.52
SRFP11831 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.28■□□□□ 0.52
SRFP11831 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.28■□□□□ 0.52
SRFP11831 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRFP11831 AC122714.2-201ENST00000502787 707 ntBASIC18.28■□□□□ 0.52
SRFP11831 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.28■□□□□ 0.52
SRFP11831 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.28■□□□□ 0.52
SRFP11831 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.28■□□□□ 0.52
SRFP11831 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.28■□□□□ 0.52
SRFP11831 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 AD001527.2-201ENST00000622994 785 ntBASIC18.28■□□□□ 0.52
SRFP11831 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRFP11831 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRFP11831 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
SRFP11831 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.28■□□□□ 0.52
SRFP11831 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRFP11831 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRFP11831 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SRFP11831 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SRFP11831 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SRFP11831 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SRFP11831 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRFP11831 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRFP11831 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.27■□□□□ 0.52
SRFP11831 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRFP11831 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRFP11831 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.27■□□□□ 0.52
SRFP11831 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRFP11831 SPDYE21P-201ENST00000413323 827 ntBASIC18.27■□□□□ 0.52
SRFP11831 AL645939.2-201ENST00000427340 991 ntBASIC18.27■□□□□ 0.52
SRFP11831 CNN2P11-201ENST00000429351 262 ntBASIC18.27■□□□□ 0.52
SRFP11831 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.27■□□□□ 0.52
SRFP11831 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SRFP11831 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
SRFP11831 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SRFP11831 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.27■□□□□ 0.52
SRFP11831 AC004817.3-201ENST00000602957 2129 ntBASIC18.27■□□□□ 0.52
SRFP11831 AL589182.2-201ENST00000619332 1049 ntBASIC18.27■□□□□ 0.52
SRFP11831 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRFP11831 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.27■□□□□ 0.52
SRFP11831 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SRFP11831 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SRFP11831 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRFP11831 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRFP11831 PCDHAC2-203ENST00000615316 3011 ntBASIC18.27■□□□□ 0.51
SRFP11831 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.27■□□□□ 0.51
SRFP11831 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRFP11831 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.27■□□□□ 0.51
SRFP11831 AL161938.1-201ENST00000569833 2180 ntBASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms