Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 SDHAP2-201ENST00000455183 2001 ntBASIC18.37■□□□□ 0.53
CHRNB1P11230 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNB1P11230 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 AC099343.3-201ENST00000605834 2503 ntBASIC18.37■□□□□ 0.53
CHRNB1P11230 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNB1P11230 MED15P5-201ENST00000423150 992 ntBASIC18.37■□□□□ 0.53
CHRNB1P11230 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNB1P11230 AC098831.1-202ENST00000438821 336 ntBASIC18.37■□□□□ 0.53
CHRNB1P11230 AC012640.2-201ENST00000561606 901 ntBASIC18.37■□□□□ 0.53
CHRNB1P11230 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNB1P11230 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNB1P11230 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNB1P11230 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHRNB1P11230 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CHRNB1P11230 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRNB1P11230 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNB1P11230 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CHRNB1P11230 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNB1P11230 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB1P11230 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHRNB1P11230 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB1P11230 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB1P11230 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB1P11230 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB1P11230 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHRNB1P11230 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB1P11230 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB1P11230 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNB1P11230 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB1P11230 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHRNB1P11230 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNB1P11230 UPF3AP3-201ENST00000420996 769 ntBASIC18.36■□□□□ 0.53
CHRNB1P11230 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRNB1P11230 AL591424.1-201ENST00000442569 1213 ntBASIC18.36■□□□□ 0.53
CHRNB1P11230 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CHRNB1P11230 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB1P11230 AC092910.1-201ENST00000482027 1129 ntBASIC18.36■□□□□ 0.53
CHRNB1P11230 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRNB1P11230 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHRNB1P11230 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNB1P11230 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNB1P11230 OR7E14P-202ENST00000530490 1290 ntBASIC18.36■□□□□ 0.53
CHRNB1P11230 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRNB1P11230 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRNB1P11230 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNB1P11230 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNB1P11230 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHRNB1P11230 AL356309.3-201ENST00000624132 1934 ntBASIC18.36■□□□□ 0.53
CHRNB1P11230 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNB1P11230 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNB1P11230 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHRNB1P11230 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB1P11230 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHRNB1P11230 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHRNB1P11230 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNB1P11230 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CHRNB1P11230 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNB1P11230 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNB1P11230 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRNB1P11230 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.35■□□□□ 0.53
CHRNB1P11230 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRNB1P11230 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CHRNB1P11230 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.35■□□□□ 0.53
CHRNB1P11230 Z83851.2-201ENST00000609564 659 ntBASIC18.35■□□□□ 0.53
CHRNB1P11230 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 AL032819.2-201ENST00000624543 2162 ntBASIC18.35■□□□□ 0.53
CHRNB1P11230 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNB1P11230 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHRNB1P11230 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHRNB1P11230 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNB1P11230 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CHRNB1P11230 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNB1P11230 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms