Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPRFP10586 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRFP10586 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRFP10586 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPRFP10586 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPRFP10586 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPRFP10586 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPRFP10586 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PTPRFP10586 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPRFP10586 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.73■□□□□ 0.91
PTPRFP10586 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.73■□□□□ 0.91
PTPRFP10586 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.73■□□□□ 0.91
PTPRFP10586 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PTPRFP10586 BX005266.1-201ENST00000473402 457 ntBASIC20.73■□□□□ 0.91
PTPRFP10586 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PTPRFP10586 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PTPRFP10586 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PTPRFP10586 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PTPRFP10586 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPRFP10586 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PTPRFP10586 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.72■□□□□ 0.91
PTPRFP10586 AC122714.2-201ENST00000502787 707 ntBASIC20.72■□□□□ 0.91
PTPRFP10586 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.72■□□□□ 0.91
PTPRFP10586 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
PTPRFP10586 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 NCF1C-201ENST00000438382 1427 ntBASIC20.72■□□□□ 0.91
PTPRFP10586 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPRFP10586 GMCL1P1-201ENST00000463439 1581 ntBASIC20.72■□□□□ 0.91
PTPRFP10586 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPRFP10586 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRFP10586 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPRFP10586 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPRFP10586 AC108073.2-201ENST00000464002 357 ntBASIC20.72■□□□□ 0.91
PTPRFP10586 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PTPRFP10586 AC136632.2-201ENST00000512891 861 ntBASIC20.72■□□□□ 0.91
PTPRFP10586 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPRFP10586 AC006557.2-201ENST00000592985 1240 ntBASIC20.72■□□□□ 0.91
PTPRFP10586 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PTPRFP10586 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPRFP10586 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PTPRFP10586 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRFP10586 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRFP10586 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.71■□□□□ 0.91
PTPRFP10586 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PTPRFP10586 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRFP10586 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRFP10586 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRFP10586 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRFP10586 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRFP10586 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPRFP10586 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PTPRFP10586 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PTPRFP10586 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PTPRFP10586 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PTPRFP10586 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.7■□□□□ 0.91
PTPRFP10586 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.7■□□□□ 0.91
PTPRFP10586 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.7■□□□□ 0.91
PTPRFP10586 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.7■□□□□ 0.91
PTPRFP10586 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.7■□□□□ 0.91
PTPRFP10586 AP000867.4-201ENST00000641616 219 ntBASIC20.7■□□□□ 0.91
PTPRFP10586 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPRFP10586 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPRFP10586 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRFP10586 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.7■□□□□ 0.9
PTPRFP10586 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRFP10586 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPRFP10586 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PTPRFP10586 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPRFP10586 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPRFP10586 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.7■□□□□ 0.9
PTPRFP10586 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPRFP10586 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRFP10586 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPRFP10586 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPRFP10586 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PTPRFP10586 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.7■□□□□ 0.9
PTPRFP10586 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRFP10586 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPRFP10586 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms