Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 CA15P1-201ENST00000481698 905 ntBASIC15.57■□□□□ 0.08
VSIG8P0DPA2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 MIR4674-201ENST00000582457 87 ntBASIC15.57■□□□□ 0.08
VSIG8P0DPA2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 AC073912.3-201ENST00000624414 853 ntBASIC15.57■□□□□ 0.08
VSIG8P0DPA2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 LINC01126-201ENST00000623515 1646 ntBASIC15.57■□□□□ 0.08
VSIG8P0DPA2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VSIG8P0DPA2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.56■□□□□ 0.08
VSIG8P0DPA2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 HOXB1-202ENST00000577092 1414 ntBASIC15.56■□□□□ 0.08
VSIG8P0DPA2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VSIG8P0DPA2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 STK33P1-201ENST00000423835 1218 ntBASIC15.55■□□□□ 0.08
VSIG8P0DPA2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 AC116562.2-201ENST00000507042 360 ntBASIC15.55■□□□□ 0.08
VSIG8P0DPA2 AC008550.1-201ENST00000511500 884 ntBASIC15.55■□□□□ 0.08
VSIG8P0DPA2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 CD177P1-201ENST00000606252 935 ntBASIC15.55■□□□□ 0.08
VSIG8P0DPA2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.55■□□□□ 0.08
VSIG8P0DPA2 REXO1L12P-201ENST00000622156 912 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms