Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.2■□□□□ 0.5
COL4A2P08572 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.2■□□□□ 0.5
COL4A2P08572 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.2■□□□□ 0.5
COL4A2P08572 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.2■□□□□ 0.5
COL4A2P08572 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COL4A2P08572 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.2■□□□□ 0.5
COL4A2P08572 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
COL4A2P08572 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 AC005332.7-201ENST00000614046 2005 ntBASIC18.2■□□□□ 0.5
COL4A2P08572 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL4A2P08572 METTL21AP1-201ENST00000438852 635 ntBASIC18.2■□□□□ 0.5
COL4A2P08572 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COL4A2P08572 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
COL4A2P08572 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.2■□□□□ 0.5
COL4A2P08572 ESPNP-201ENST00000270691 2015 ntBASIC18.2■□□□□ 0.5
COL4A2P08572 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.2■□□□□ 0.5
COL4A2P08572 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL4A2P08572 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL4A2P08572 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.19■□□□□ 0.5
COL4A2P08572 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.19■□□□□ 0.5
COL4A2P08572 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL4A2P08572 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.19■□□□□ 0.5
COL4A2P08572 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL4A2P08572 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.19■□□□□ 0.5
COL4A2P08572 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL4A2P08572 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.19■□□□□ 0.5
COL4A2P08572 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.19■□□□□ 0.5
COL4A2P08572 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.19■□□□□ 0.5
COL4A2P08572 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.19■□□□□ 0.5
COL4A2P08572 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COL4A2P08572 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.19■□□□□ 0.5
COL4A2P08572 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COL4A2P08572 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL4A2P08572 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL4A2P08572 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL4A2P08572 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.19■□□□□ 0.5
COL4A2P08572 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.19■□□□□ 0.5
COL4A2P08572 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.19■□□□□ 0.5
COL4A2P08572 AC022898.2-201ENST00000616822 1312 ntBASIC18.19■□□□□ 0.5
COL4A2P08572 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.19■□□□□ 0.5
COL4A2P08572 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A2P08572 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A2P08572 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A2P08572 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
COL4A2P08572 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A2P08572 SPDYE21P-201ENST00000413323 827 ntBASIC18.18■□□□□ 0.5
COL4A2P08572 MCCD1P2-201ENST00000423228 335 ntBASIC18.18■□□□□ 0.5
COL4A2P08572 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.18■□□□□ 0.5
COL4A2P08572 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.18■□□□□ 0.5
COL4A2P08572 YBX1P5-201ENST00000509441 847 ntBASIC18.18■□□□□ 0.5
COL4A2P08572 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.18■□□□□ 0.5
COL4A2P08572 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.18■□□□□ 0.5
COL4A2P08572 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.18■□□□□ 0.5
COL4A2P08572 AL022326.1-202ENST00000641533 845 ntBASIC18.18■□□□□ 0.5
COL4A2P08572 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.18■□□□□ 0.5
COL4A2P08572 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A2P08572 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A2P08572 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A2P08572 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A2P08572 AL353593.2-201ENST00000602529 1483 ntBASIC18.18■□□□□ 0.5
COL4A2P08572 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.18■□□□□ 0.5
COL4A2P08572 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.18■□□□□ 0.5
COL4A2P08572 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.18■□□□□ 0.5
COL4A2P08572 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.18■□□□□ 0.5
COL4A2P08572 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
COL4A2P08572 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A2P08572 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A2P08572 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
COL4A2P08572 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A2P08572 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A2P08572 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A2P08572 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL4A2P08572 NCF1C-201ENST00000438382 1427 ntBASIC18.17■□□□□ 0.5
COL4A2P08572 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A2P08572 AC097374.2-201ENST00000618617 1306 ntBASIC18.17■□□□□ 0.5
COL4A2P08572 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A2P08572 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A2P08572 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A2P08572 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A2P08572 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.17■□□□□ 0.5
COL4A2P08572 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A2P08572 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A2P08572 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.17■□□□□ 0.5
COL4A2P08572 KRT18P2-201ENST00000447938 1258 ntBASIC18.17■□□□□ 0.5
COL4A2P08572 PGM5P2-202ENST00000637225 1043 ntBASIC18.17■□□□□ 0.5
COL4A2P08572 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.17■□□□□ 0.5
COL4A2P08572 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.17■□□□□ 0.5
COL4A2P08572 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.17■□□□□ 0.5
COL4A2P08572 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A2P08572 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms