Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.89■□□□□ 0.45
CAPN1P07384 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.89■□□□□ 0.45
CAPN1P07384 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CAPN1P07384 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CAPN1P07384 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPN1P07384 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
CAPN1P07384 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 AC067852.2-201ENST00000590513 2313 ntBASIC17.88■□□□□ 0.45
CAPN1P07384 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CAPN1P07384 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CAPN1P07384 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.88■□□□□ 0.45
CAPN1P07384 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPN1P07384 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN1P07384 AC092647.4-201ENST00000457211 535 ntBASIC17.88■□□□□ 0.45
CAPN1P07384 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CAPN1P07384 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.88■□□□□ 0.45
CAPN1P07384 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 AC140113.3-201ENST00000605663 199 ntBASIC17.88■□□□□ 0.45
CAPN1P07384 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPN1P07384 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPN1P07384 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN1P07384 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.88■□□□□ 0.45
CAPN1P07384 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CAPN1P07384 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CAPN1P07384 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CAPN1P07384 KRT8P50-201ENST00000562022 1438 ntBASIC17.88■□□□□ 0.45
CAPN1P07384 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CAPN1P07384 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPN1P07384 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN1P07384 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN1P07384 FZD10-202ENST00000539839 3282 ntBASIC17.87■□□□□ 0.45
CAPN1P07384 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CAPN1P07384 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 LTB4R2-202ENST00000528054 3092 ntBASIC17.87■□□□□ 0.45
CAPN1P07384 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN1P07384 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 AC099343.3-201ENST00000605834 2503 ntBASIC17.87■□□□□ 0.45
CAPN1P07384 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CAPN1P07384 AC009947.2-201ENST00000444014 672 ntBASIC17.87■□□□□ 0.45
CAPN1P07384 KRT18P38-201ENST00000449496 1282 ntBASIC17.87■□□□□ 0.45
CAPN1P07384 HOMER2P1-201ENST00000455653 964 ntBASIC17.87■□□□□ 0.45
CAPN1P07384 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CAPN1P07384 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.87■□□□□ 0.45
CAPN1P07384 MIR3180-5-201ENST00000583743 153 ntBASIC17.87■□□□□ 0.45
CAPN1P07384 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.87■□□□□ 0.45
CAPN1P07384 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN1P07384 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.87■□□□□ 0.45
CAPN1P07384 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CAPN1P07384 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN1P07384 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN1P07384 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN1P07384 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN1P07384 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CAPN1P07384 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN1P07384 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN1P07384 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN1P07384 AC008764.6-201ENST00000595909 2069 ntBASIC17.86■□□□□ 0.45
CAPN1P07384 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN1P07384 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN1P07384 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.86■□□□□ 0.45
CAPN1P07384 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms