Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.28■□□□□ 0.04
CD74P04233 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.28■□□□□ 0.04
CD74P04233 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.28■□□□□ 0.04
CD74P04233 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CD74P04233 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.28■□□□□ 0.04
CD74P04233 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CD74P04233 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.28■□□□□ 0.04
CD74P04233 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.28■□□□□ 0.04
CD74P04233 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.28■□□□□ 0.04
CD74P04233 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD74P04233 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CD74P04233 AL163051.1-201ENST00000569214 1512 ntBASIC15.27■□□□□ 0.04
CD74P04233 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CD74P04233 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.27■□□□□ 0.04
CD74P04233 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.27■□□□□ 0.04
CD74P04233 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 AC004951.3-201ENST00000418645 1148 ntBASIC15.27■□□□□ 0.04
CD74P04233 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.27■□□□□ 0.04
CD74P04233 TSPY6P-201ENST00000448518 926 ntBASIC15.27■□□□□ 0.04
CD74P04233 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.27■□□□□ 0.04
CD74P04233 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.27■□□□□ 0.04
CD74P04233 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CD74P04233 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.27■□□□□ 0.04
CD74P04233 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.27■□□□□ 0.04
CD74P04233 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.27■□□□□ 0.04
CD74P04233 AC008622.2-201ENST00000617006 1229 ntBASIC15.27■□□□□ 0.04
CD74P04233 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD74P04233 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CD74P04233 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.27■□□□□ 0.03
CD74P04233 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.27■□□□□ 0.03
CD74P04233 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD74P04233 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.26■□□□□ 0.03
CD74P04233 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CD74P04233 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.26■□□□□ 0.03
CD74P04233 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CD74P04233 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.26■□□□□ 0.03
CD74P04233 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CD74P04233 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.26■□□□□ 0.03
CD74P04233 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD74P04233 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD74P04233 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CD74P04233 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.26■□□□□ 0.03
CD74P04233 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.26■□□□□ 0.03
CD74P04233 KRT16P5-201ENST00000455284 522 ntBASIC15.26■□□□□ 0.03
CD74P04233 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.26■□□□□ 0.03
CD74P04233 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CD74P04233 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD74P04233 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD74P04233 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD74P04233 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms