Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV12-3P01733 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV12-3P01733 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 AP003733.1-201ENST00000491725 852 ntBASIC14.03□□□□□ -0.16
TRBV12-3P01733 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 ABALON-201ENST00000629058 1903 ntBASIC14.03□□□□□ -0.16
TRBV12-3P01733 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV12-3P01733 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRBV12-3P01733 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRBV12-3P01733 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRBV12-3P01733 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRBV12-3P01733 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRBV12-3P01733 AC018470.1-201ENST00000624790 3129 ntBASIC14.02□□□□□ -0.16
TRBV12-3P01733 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.02□□□□□ -0.16
TRBV12-3P01733 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRBV12-3P01733 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 AL390961.4-201ENST00000623958 2535 ntBASIC14.02□□□□□ -0.16
TRBV12-3P01733 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 LINC00602-201ENST00000629776 2065 ntBASIC14.02□□□□□ -0.16
TRBV12-3P01733 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRBV12-3P01733 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV12-3P01733 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRBV12-3P01733 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV12-3P01733 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.02□□□□□ -0.16
TRBV12-3P01733 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV12-3P01733 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV12-3P01733 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 AL136038.3-201ENST00000561909 1096 ntBASIC14.02□□□□□ -0.17
TRBV12-3P01733 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV12-3P01733 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms