Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ABCA1O95477 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ABCA1O95477 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ABCA1O95477 RNPS1P1-201ENST00000507437 918 ntBASIC15.21■□□□□ 0.03
ABCA1O95477 AC073648.2-201ENST00000510116 352 ntBASIC15.21■□□□□ 0.03
ABCA1O95477 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.21■□□□□ 0.03
ABCA1O95477 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.21■□□□□ 0.03
ABCA1O95477 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.21■□□□□ 0.03
ABCA1O95477 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.21■□□□□ 0.03
ABCA1O95477 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.21■□□□□ 0.03
ABCA1O95477 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ABCA1O95477 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.21■□□□□ 0.03
ABCA1O95477 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ABCA1O95477 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ABCA1O95477 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.21■□□□□ 0.02
ABCA1O95477 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
ABCA1O95477 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.21■□□□□ 0.02
ABCA1O95477 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.2■□□□□ 0.02
ABCA1O95477 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.2■□□□□ 0.02
ABCA1O95477 BX842568.4-201ENST00000421222 227 ntBASIC15.2■□□□□ 0.02
ABCA1O95477 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
ABCA1O95477 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.2■□□□□ 0.02
ABCA1O95477 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ABCA1O95477 AL049812.1-201ENST00000432563 2267 ntBASIC15.2■□□□□ 0.02
ABCA1O95477 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ABCA1O95477 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.2■□□□□ 0.02
ABCA1O95477 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
ABCA1O95477 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.2■□□□□ 0.02
ABCA1O95477 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.2■□□□□ 0.02
ABCA1O95477 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 RPL13AP23-201ENST00000480739 586 ntBASIC15.2■□□□□ 0.02
ABCA1O95477 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.2■□□□□ 0.02
ABCA1O95477 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.2■□□□□ 0.02
ABCA1O95477 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.2■□□□□ 0.02
ABCA1O95477 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 AC006333.2-201ENST00000607957 2099 ntBASIC15.2■□□□□ 0.02
ABCA1O95477 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.2■□□□□ 0.02
ABCA1O95477 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ABCA1O95477 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.2■□□□□ 0.02
ABCA1O95477 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
ABCA1O95477 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.19■□□□□ 0.02
ABCA1O95477 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ABCA1O95477 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.19■□□□□ 0.02
ABCA1O95477 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.19■□□□□ 0.02
ABCA1O95477 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
ABCA1O95477 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.19■□□□□ 0.02
ABCA1O95477 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ABCA1O95477 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 PMS2P7-201ENST00000506558 1336 ntBASIC15.19■□□□□ 0.02
ABCA1O95477 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.19■□□□□ 0.02
ABCA1O95477 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.19■□□□□ 0.02
ABCA1O95477 TEX21P-204ENST00000641479 1693 ntBASIC15.19■□□□□ 0.02
ABCA1O95477 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ABCA1O95477 AC093503.3-201ENST00000624917 2352 ntBASIC15.19■□□□□ 0.02
ABCA1O95477 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
ABCA1O95477 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.19■□□□□ 0.02
ABCA1O95477 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ABCA1O95477 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ABCA1O95477 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ABCA1O95477 AL591684.3-201ENST00000605187 298 ntBASIC15.19■□□□□ 0.02
ABCA1O95477 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.19■□□□□ 0.02
ABCA1O95477 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.19■□□□□ 0.02
ABCA1O95477 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ABCA1O95477 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ABCA1O95477 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ABCA1O95477 AL512353.2-201ENST00000448759 1962 ntBASIC15.18■□□□□ 0.02
ABCA1O95477 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ABCA1O95477 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ABCA1O95477 NEFHP1-201ENST00000412845 2629 ntBASIC15.18■□□□□ 0.02
ABCA1O95477 AC104581.1-202ENST00000635932 2618 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms