Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.23■□□□□ 0.03
SIX6O95475 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SIX6O95475 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SIX6O95475 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SIX6O95475 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SIX6O95475 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 PHGDH-209ENST00000641074 1780 ntBASIC15.23■□□□□ 0.03
SIX6O95475 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 MYLKP1-201ENST00000509077 1580 ntBASIC15.23■□□□□ 0.03
SIX6O95475 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.23■□□□□ 0.03
SIX6O95475 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.23■□□□□ 0.03
SIX6O95475 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX6O95475 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 AL355312.1-201ENST00000407115 2176 ntBASIC15.22■□□□□ 0.03
SIX6O95475 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SIX6O95475 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.22■□□□□ 0.03
SIX6O95475 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 AGGF1P2-201ENST00000426656 2106 ntBASIC15.22■□□□□ 0.03
SIX6O95475 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SIX6O95475 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.22■□□□□ 0.03
SIX6O95475 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SIX6O95475 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.22■□□□□ 0.03
SIX6O95475 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.22■□□□□ 0.03
SIX6O95475 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SIX6O95475 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SIX6O95475 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.22■□□□□ 0.03
SIX6O95475 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 AC008406.3-201ENST00000620001 1374 ntBASIC15.22■□□□□ 0.03
SIX6O95475 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIX6O95475 PCDHA1-201ENST00000378133 2726 ntBASIC15.22■□□□□ 0.03
SIX6O95475 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SIX6O95475 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SIX6O95475 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
SIX6O95475 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SIX6O95475 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX6O95475 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SIX6O95475 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 CYP2T1P-201ENST00000432607 1285 ntBASIC15.21■□□□□ 0.03
SIX6O95475 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.21■□□□□ 0.03
SIX6O95475 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX6O95475 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.21■□□□□ 0.03
SIX6O95475 AC142381.2-201ENST00000566120 298 ntBASIC15.21■□□□□ 0.03
SIX6O95475 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SIX6O95475 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX6O95475 AC008694.1-202ENST00000636953 945 ntBASIC15.21■□□□□ 0.03
SIX6O95475 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX6O95475 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SIX6O95475 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms