Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.62■■□□□ 1.05
MBD4O95243 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
MBD4O95243 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
MBD4O95243 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MBD4O95243 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
MBD4O95243 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MBD4O95243 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
MBD4O95243 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MBD4O95243 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MBD4O95243 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MBD4O95243 IGHV3-47-201ENST00000425060 335 ntBASIC21.62■■□□□ 1.05
MBD4O95243 MTCL1P1-201ENST00000446207 792 ntBASIC21.62■■□□□ 1.05
MBD4O95243 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
MBD4O95243 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.62■■□□□ 1.05
MBD4O95243 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
MBD4O95243 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.62■■□□□ 1.05
MBD4O95243 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.62■■□□□ 1.05
MBD4O95243 KRT126P-201ENST00000549467 1181 ntBASIC21.62■■□□□ 1.05
MBD4O95243 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.62■■□□□ 1.05
MBD4O95243 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MBD4O95243 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.62■■□□□ 1.05
MBD4O95243 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
MBD4O95243 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.62■■□□□ 1.05
MBD4O95243 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.62■■□□□ 1.05
MBD4O95243 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
MBD4O95243 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.61■■□□□ 1.05
MBD4O95243 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.61■■□□□ 1.05
MBD4O95243 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.61■■□□□ 1.05
MBD4O95243 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 AL020996.1-203ENST00000536896 2307 ntBASIC21.61■■□□□ 1.05
MBD4O95243 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
MBD4O95243 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 AC246785.2-201ENST00000432512 513 ntBASIC21.61■■□□□ 1.05
MBD4O95243 VENTXP7-201ENST00000475503 772 ntBASIC21.61■■□□□ 1.05
MBD4O95243 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.61■■□□□ 1.05
MBD4O95243 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.61■■□□□ 1.05
MBD4O95243 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.61■■□□□ 1.05
MBD4O95243 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.61■■□□□ 1.05
MBD4O95243 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
MBD4O95243 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.61■■□□□ 1.05
MBD4O95243 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.61■■□□□ 1.05
MBD4O95243 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.61■■□□□ 1.05
MBD4O95243 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MBD4O95243 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
MBD4O95243 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
MBD4O95243 NSUN5P1-202ENST00000421140 1535 ntBASIC21.6■■□□□ 1.05
MBD4O95243 NSUN5P2-203ENST00000457352 1529 ntBASIC21.6■■□□□ 1.05
MBD4O95243 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.6■■□□□ 1.05
MBD4O95243 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.6■■□□□ 1.05
MBD4O95243 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
MBD4O95243 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
MBD4O95243 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
MBD4O95243 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.6■■□□□ 1.05
MBD4O95243 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.6■■□□□ 1.05
MBD4O95243 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.6■■□□□ 1.05
MBD4O95243 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
MBD4O95243 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.6■■□□□ 1.05
MBD4O95243 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MBD4O95243 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
MBD4O95243 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
MBD4O95243 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD4O95243 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD4O95243 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
MBD4O95243 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MBD4O95243 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MBD4O95243 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
MBD4O95243 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.59■■□□□ 1.05
MBD4O95243 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.59■■□□□ 1.05
MBD4O95243 FOSL1P1-201ENST00000511041 816 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms