Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
BEST1O76090 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
BEST1O76090 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.02■□□□□ 0.64
BEST1O76090 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.02■□□□□ 0.64
BEST1O76090 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
BEST1O76090 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.02■□□□□ 0.64
BEST1O76090 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.02■□□□□ 0.64
BEST1O76090 KRT18P65-201ENST00000439811 1286 ntBASIC19.02■□□□□ 0.64
BEST1O76090 DUSP5P1-201ENST00000441325 1139 ntBASIC19.02■□□□□ 0.64
BEST1O76090 MTCL1P1-201ENST00000446207 792 ntBASIC19.02■□□□□ 0.64
BEST1O76090 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.02■□□□□ 0.64
BEST1O76090 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.02■□□□□ 0.64
BEST1O76090 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.02■□□□□ 0.64
BEST1O76090 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.02■□□□□ 0.64
BEST1O76090 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.02■□□□□ 0.64
BEST1O76090 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST1O76090 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.02■□□□□ 0.63
BEST1O76090 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BEST1O76090 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.01■□□□□ 0.63
BEST1O76090 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
BEST1O76090 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.01■□□□□ 0.63
BEST1O76090 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.01■□□□□ 0.63
BEST1O76090 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.01■□□□□ 0.63
BEST1O76090 MIR3652-201ENST00000579335 131 ntBASIC19.01■□□□□ 0.63
BEST1O76090 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.01■□□□□ 0.63
BEST1O76090 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.01■□□□□ 0.63
BEST1O76090 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.01■□□□□ 0.63
BEST1O76090 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.01■□□□□ 0.63
BEST1O76090 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST1O76090 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.01■□□□□ 0.63
BEST1O76090 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.01■□□□□ 0.63
BEST1O76090 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19■□□□□ 0.63
BEST1O76090 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19■□□□□ 0.63
BEST1O76090 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
BEST1O76090 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19■□□□□ 0.63
BEST1O76090 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19■□□□□ 0.63
BEST1O76090 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19■□□□□ 0.63
BEST1O76090 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19■□□□□ 0.63
BEST1O76090 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 IGHV3-47-201ENST00000425060 335 ntBASIC19■□□□□ 0.63
BEST1O76090 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19■□□□□ 0.63
BEST1O76090 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19■□□□□ 0.63
BEST1O76090 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19■□□□□ 0.63
BEST1O76090 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19■□□□□ 0.63
BEST1O76090 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 PNN-202ENST00000553331 656 ntTSL 3 BASIC19■□□□□ 0.63
BEST1O76090 AC074051.2-201ENST00000565115 352 ntBASIC19■□□□□ 0.63
BEST1O76090 AC011840.4-201ENST00000578471 627 ntBASIC19■□□□□ 0.63
BEST1O76090 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
BEST1O76090 AC005336.2-201ENST00000593183 939 ntBASIC19■□□□□ 0.63
BEST1O76090 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19■□□□□ 0.63
BEST1O76090 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19■□□□□ 0.63
BEST1O76090 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19■□□□□ 0.63
BEST1O76090 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST1O76090 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19■□□□□ 0.63
BEST1O76090 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms