Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC25.39■■□□□ 1.66
NPHP4O75161 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
NPHP4O75161 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.39■■□□□ 1.66
NPHP4O75161 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NPHP4O75161 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NPHP4O75161 MYLKP1-201ENST00000509077 1580 ntBASIC25.39■■□□□ 1.65
NPHP4O75161 AC010460.3-201ENST00000511359 1579 ntBASIC25.39■■□□□ 1.65
NPHP4O75161 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
NPHP4O75161 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC25.39■■□□□ 1.65
NPHP4O75161 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP4O75161 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP4O75161 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC25.38■■□□□ 1.65
NPHP4O75161 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC25.38■■□□□ 1.65
NPHP4O75161 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC25.38■■□□□ 1.65
NPHP4O75161 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC25.38■■□□□ 1.65
NPHP4O75161 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC25.38■■□□□ 1.65
NPHP4O75161 AQP6-205ENST00000618286 829 ntTSL 5 BASIC25.38■■□□□ 1.65
NPHP4O75161 AC073592.5-201ENST00000624854 528 ntBASIC25.38■■□□□ 1.65
NPHP4O75161 AC092902.6-201ENST00000641783 218 ntBASIC25.38■■□□□ 1.65
NPHP4O75161 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP4O75161 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP4O75161 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP4O75161 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP4O75161 AC112907.3-201ENST00000577781 2400 ntBASIC25.38■■□□□ 1.65
NPHP4O75161 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC25.38■■□□□ 1.65
NPHP4O75161 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP4O75161 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC25.38■■□□□ 1.65
NPHP4O75161 NCF1C-201ENST00000438382 1427 ntBASIC25.38■■□□□ 1.65
NPHP4O75161 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP4O75161 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP4O75161 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP4O75161 AC023141.5-201ENST00000458585 616 ntBASIC25.37■■□□□ 1.65
NPHP4O75161 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP4O75161 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC25.37■■□□□ 1.65
NPHP4O75161 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC25.37■■□□□ 1.65
NPHP4O75161 DUT-210ENST00000559935 569 ntTSL 3 BASIC25.37■■□□□ 1.65
NPHP4O75161 AC096734.2-201ENST00000562054 433 ntBASIC25.37■■□□□ 1.65
NPHP4O75161 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
NPHP4O75161 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
NPHP4O75161 AC105339.1-204ENST00000636249 355 ntBASIC25.37■■□□□ 1.65
NPHP4O75161 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC25.37■■□□□ 1.65
NPHP4O75161 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP4O75161 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC25.37■■□□□ 1.65
NPHP4O75161 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC25.37■■□□□ 1.65
NPHP4O75161 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC25.37■■□□□ 1.65
NPHP4O75161 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC25.37■■□□□ 1.65
NPHP4O75161 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
NPHP4O75161 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP4O75161 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP4O75161 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC25.37■■□□□ 1.65
NPHP4O75161 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP4O75161 PMS2P4-201ENST00000412466 1052 ntBASIC25.37■■□□□ 1.65
NPHP4O75161 AC096633.1-201ENST00000422446 749 ntBASIC25.37■■□□□ 1.65
NPHP4O75161 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC25.37■■□□□ 1.65
NPHP4O75161 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC25.37■■□□□ 1.65
NPHP4O75161 DAD1-205ENST00000543337 501 ntTSL 3 BASIC25.37■■□□□ 1.65
NPHP4O75161 AC025678.2-201ENST00000562061 970 ntBASIC25.37■■□□□ 1.65
NPHP4O75161 CYB561-217ENST00000582997 877 ntTSL 5 BASIC25.37■■□□□ 1.65
NPHP4O75161 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC25.37■■□□□ 1.65
NPHP4O75161 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP4O75161 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP4O75161 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP4O75161 AC063926.2-201ENST00000623766 1308 ntBASIC25.36■■□□□ 1.65
NPHP4O75161 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP4O75161 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP4O75161 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.36■■□□□ 1.65
NPHP4O75161 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP4O75161 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.36■■□□□ 1.65
NPHP4O75161 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP4O75161 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP4O75161 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC25.36■■□□□ 1.65
NPHP4O75161 HLA-DRB6-201ENST00000411500 1235 ntBASIC25.36■■□□□ 1.65
NPHP4O75161 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP4O75161 RHOQP3-201ENST00000437982 621 ntBASIC25.36■■□□□ 1.65
NPHP4O75161 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC25.36■■□□□ 1.65
NPHP4O75161 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC25.36■■□□□ 1.65
NPHP4O75161 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC25.36■■□□□ 1.65
NPHP4O75161 AQP6-203ENST00000551733 849 ntTSL 3 BASIC25.36■■□□□ 1.65
NPHP4O75161 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC25.36■■□□□ 1.65
NPHP4O75161 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
NPHP4O75161 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP4O75161 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP4O75161 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP4O75161 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC25.35■■□□□ 1.65
NPHP4O75161 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
NPHP4O75161 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP4O75161 TBC1D3P5-201ENST00000579401 1545 ntBASIC25.35■■□□□ 1.65
NPHP4O75161 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
NPHP4O75161 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP4O75161 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.35■■□□□ 1.65
NPHP4O75161 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP4O75161 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP4O75161 MRPL20P1-201ENST00000400819 433 ntBASIC25.35■■□□□ 1.65
NPHP4O75161 FAM86GP-201ENST00000448322 971 ntBASIC25.35■■□□□ 1.65
NPHP4O75161 AC005225.4-201ENST00000557330 545 ntBASIC25.35■■□□□ 1.65
NPHP4O75161 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP4O75161 AC022145.2-201ENST00000598203 171 ntBASIC25.35■■□□□ 1.65
NPHP4O75161 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC25.35■■□□□ 1.65
NPHP4O75161 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC25.35■■□□□ 1.65
NPHP4O75161 AL805961.1-202ENST00000641562 540 ntBASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms