Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL023284.2-201ENST00000405850 579 ntBASIC17■□□□□ 0.31
HCN1O60741 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17■□□□□ 0.31
HCN1O60741 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17■□□□□ 0.31
HCN1O60741 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17■□□□□ 0.31
HCN1O60741 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HCN1O60741 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HCN1O60741 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17■□□□□ 0.31
HCN1O60741 AL162741.1-201ENST00000565563 1558 ntBASIC17■□□□□ 0.31
HCN1O60741 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17■□□□□ 0.31
HCN1O60741 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 MTMR9LP-203ENST00000426597 1545 ntBASIC17■□□□□ 0.31
HCN1O60741 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HCN1O60741 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
HCN1O60741 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.99■□□□□ 0.31
HCN1O60741 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
HCN1O60741 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HCN1O60741 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.99■□□□□ 0.31
HCN1O60741 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
HCN1O60741 STARP1-201ENST00000397973 869 ntBASIC16.99■□□□□ 0.31
HCN1O60741 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.99■□□□□ 0.31
HCN1O60741 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.99■□□□□ 0.31
HCN1O60741 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.99■□□□□ 0.31
HCN1O60741 AL671277.2-201ENST00000458060 996 ntBASIC16.99■□□□□ 0.31
HCN1O60741 AL359075.1-203ENST00000462729 1002 ntBASIC16.99■□□□□ 0.31
HCN1O60741 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.99■□□□□ 0.31
HCN1O60741 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.99■□□□□ 0.31
HCN1O60741 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 MIR3180-5-201ENST00000583743 153 ntBASIC16.99■□□□□ 0.31
HCN1O60741 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.99■□□□□ 0.31
HCN1O60741 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
HCN1O60741 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.99■□□□□ 0.31
HCN1O60741 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.99■□□□□ 0.31
HCN1O60741 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 ABALON-201ENST00000629058 1903 ntBASIC16.99■□□□□ 0.31
HCN1O60741 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HCN1O60741 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.99■□□□□ 0.31
HCN1O60741 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HCN1O60741 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.99■□□□□ 0.31
HCN1O60741 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 KRT8P32-201ENST00000512863 1461 ntBASIC16.99■□□□□ 0.31
HCN1O60741 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.99■□□□□ 0.31
HCN1O60741 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.99■□□□□ 0.31
HCN1O60741 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HCN1O60741 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.98■□□□□ 0.31
HCN1O60741 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
HCN1O60741 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
HCN1O60741 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.98■□□□□ 0.31
HCN1O60741 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.98■□□□□ 0.31
HCN1O60741 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.98■□□□□ 0.31
HCN1O60741 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.98■□□□□ 0.31
HCN1O60741 GCSHP2-201ENST00000560971 527 ntBASIC16.98■□□□□ 0.31
HCN1O60741 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.98■□□□□ 0.31
HCN1O60741 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HCN1O60741 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.98■□□□□ 0.31
HCN1O60741 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.98■□□□□ 0.31
HCN1O60741 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCN1O60741 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms