Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
KLHL41O60662 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KLHL41O60662 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.04■□□□□ 0.48
KLHL41O60662 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.04■□□□□ 0.48
KLHL41O60662 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 AC004951.3-201ENST00000418645 1148 ntBASIC18.04■□□□□ 0.48
KLHL41O60662 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.04■□□□□ 0.48
KLHL41O60662 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.04■□□□□ 0.48
KLHL41O60662 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.04■□□□□ 0.48
KLHL41O60662 AL512604.3-201ENST00000569583 964 ntBASIC18.04■□□□□ 0.48
KLHL41O60662 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 KRT8P11-201ENST00000409686 1436 ntBASIC18.04■□□□□ 0.48
KLHL41O60662 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.04■□□□□ 0.48
KLHL41O60662 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHL41O60662 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHL41O60662 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHL41O60662 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.04■□□□□ 0.48
KLHL41O60662 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
KLHL41O60662 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.03■□□□□ 0.48
KLHL41O60662 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KLHL41O60662 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.03■□□□□ 0.48
KLHL41O60662 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 SLC25A6P5-201ENST00000435663 894 ntBASIC18.03■□□□□ 0.48
KLHL41O60662 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 Z85996.1-201ENST00000494644 937 ntBASIC18.03■□□□□ 0.48
KLHL41O60662 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 AC130371.2-201ENST00000619443 611 ntBASIC18.03■□□□□ 0.48
KLHL41O60662 AC116562.4-202ENST00000641738 218 ntBASIC18.03■□□□□ 0.48
KLHL41O60662 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
KLHL41O60662 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
KLHL41O60662 AC073508.3-201ENST00000619697 1419 ntBASIC18.03■□□□□ 0.48
KLHL41O60662 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.03■□□□□ 0.48
KLHL41O60662 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHL41O60662 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHL41O60662 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
KLHL41O60662 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.02■□□□□ 0.48
KLHL41O60662 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
KLHL41O60662 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
KLHL41O60662 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
KLHL41O60662 MESTP1-201ENST00000404287 994 ntBASIC18.02■□□□□ 0.48
KLHL41O60662 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.02■□□□□ 0.48
KLHL41O60662 BX664615.1-201ENST00000443558 458 ntBASIC18.02■□□□□ 0.48
KLHL41O60662 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.02■□□□□ 0.48
KLHL41O60662 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.02■□□□□ 0.48
KLHL41O60662 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.02■□□□□ 0.48
KLHL41O60662 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 AC099398.1-201ENST00000567919 2776 ntBASIC18.02■□□□□ 0.48
KLHL41O60662 SLC25A1P4-201ENST00000567977 778 ntBASIC18.02■□□□□ 0.48
KLHL41O60662 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
KLHL41O60662 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.02■□□□□ 0.48
KLHL41O60662 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KLHL41O60662 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.02■□□□□ 0.47
KLHL41O60662 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
KLHL41O60662 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.02■□□□□ 0.47
KLHL41O60662 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
KLHL41O60662 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KLHL41O60662 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
KLHL41O60662 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms