Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 MIR940-201ENST00000401276 94 ntBASIC18.26■□□□□ 0.51
FOXD2O60548 UPF3AP3-201ENST00000420996 769 ntBASIC18.26■□□□□ 0.51
FOXD2O60548 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 AC018712.1-201ENST00000455767 687 ntBASIC18.26■□□□□ 0.51
FOXD2O60548 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.26■□□□□ 0.51
FOXD2O60548 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXD2O60548 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXD2O60548 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.26■□□□□ 0.51
FOXD2O60548 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXD2O60548 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXD2O60548 AC027601.4-201ENST00000611259 610 ntBASIC18.26■□□□□ 0.51
FOXD2O60548 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.26■□□□□ 0.51
FOXD2O60548 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
FOXD2O60548 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXD2O60548 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.26■□□□□ 0.51
FOXD2O60548 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FOXD2O60548 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
FOXD2O60548 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FOXD2O60548 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXD2O60548 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
FOXD2O60548 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
FOXD2O60548 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXD2O60548 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXD2O60548 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXD2O60548 DNAJB3-201ENST00000446806 729 ntBASIC18.25■□□□□ 0.51
FOXD2O60548 MIR3687-2-201ENST00000577708 61 ntBASIC18.25■□□□□ 0.51
FOXD2O60548 MIR3687-1-201ENST00000614492 61 ntBASIC18.25■□□□□ 0.51
FOXD2O60548 FAM197Y3-203ENST00000618346 717 ntBASIC18.25■□□□□ 0.51
FOXD2O60548 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 AC243591.1-201ENST00000452967 1364 ntBASIC18.25■□□□□ 0.51
FOXD2O60548 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.25■□□□□ 0.51
FOXD2O60548 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
FOXD2O60548 KRT89P-201ENST00000620027 1478 ntBASIC18.25■□□□□ 0.51
FOXD2O60548 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXD2O60548 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 AC022898.2-201ENST00000616822 1312 ntBASIC18.24■□□□□ 0.51
FOXD2O60548 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 AL032819.2-201ENST00000624543 2162 ntBASIC18.24■□□□□ 0.51
FOXD2O60548 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 PGAM5P1-201ENST00000518923 814 ntBASIC18.24■□□□□ 0.51
FOXD2O60548 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.24■□□□□ 0.51
FOXD2O60548 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.24■□□□□ 0.51
FOXD2O60548 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 MIR5100-201ENST00000579544 119 ntBASIC18.24■□□□□ 0.51
FOXD2O60548 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.24■□□□□ 0.51
FOXD2O60548 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.24■□□□□ 0.51
FOXD2O60548 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.24■□□□□ 0.51
FOXD2O60548 AC024563.2-201ENST00000603282 481 ntBASIC18.24■□□□□ 0.51
FOXD2O60548 AC008608.2-201ENST00000606089 416 ntBASIC18.24■□□□□ 0.51
FOXD2O60548 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FOXD2O60548 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXD2O60548 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXD2O60548 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXD2O60548 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXD2O60548 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FOXD2O60548 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms