Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.39■□□□□ 0.53
KDELR3O43731 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.39■□□□□ 0.53
KDELR3O43731 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KDELR3O43731 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.39■□□□□ 0.53
KDELR3O43731 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
KDELR3O43731 DRAXINP1-201ENST00000437611 948 ntBASIC18.39■□□□□ 0.53
KDELR3O43731 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.39■□□□□ 0.53
KDELR3O43731 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.39■□□□□ 0.53
KDELR3O43731 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
KDELR3O43731 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDELR3O43731 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.39■□□□□ 0.53
KDELR3O43731 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KDELR3O43731 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDELR3O43731 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.38■□□□□ 0.53
KDELR3O43731 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDELR3O43731 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDELR3O43731 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.38■□□□□ 0.53
KDELR3O43731 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.38■□□□□ 0.53
KDELR3O43731 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDELR3O43731 MTCL1P1-201ENST00000446207 792 ntBASIC18.38■□□□□ 0.53
KDELR3O43731 TPSP2-201ENST00000561760 610 ntBASIC18.38■□□□□ 0.53
KDELR3O43731 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.38■□□□□ 0.53
KDELR3O43731 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
KDELR3O43731 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.38■□□□□ 0.53
KDELR3O43731 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.38■□□□□ 0.53
KDELR3O43731 AC092119.3-201ENST00000612618 583 ntBASIC18.38■□□□□ 0.53
KDELR3O43731 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDELR3O43731 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
KDELR3O43731 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDELR3O43731 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KDELR3O43731 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDELR3O43731 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KDELR3O43731 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
KDELR3O43731 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.37■□□□□ 0.53
KDELR3O43731 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.37■□□□□ 0.53
KDELR3O43731 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.37■□□□□ 0.53
KDELR3O43731 AC092329.2-201ENST00000598402 547 ntBASIC18.37■□□□□ 0.53
KDELR3O43731 AL353801.3-201ENST00000609898 542 ntBASIC18.37■□□□□ 0.53
KDELR3O43731 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
KDELR3O43731 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.37■□□□□ 0.53
KDELR3O43731 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KDELR3O43731 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.37■□□□□ 0.53
KDELR3O43731 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
KDELR3O43731 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.37■□□□□ 0.53
KDELR3O43731 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.37■□□□□ 0.53
KDELR3O43731 AL354751.1-201ENST00000412768 1863 ntBASIC18.37■□□□□ 0.53
KDELR3O43731 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDELR3O43731 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
KDELR3O43731 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.36■□□□□ 0.53
KDELR3O43731 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.36■□□□□ 0.53
KDELR3O43731 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.36■□□□□ 0.53
KDELR3O43731 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.36■□□□□ 0.53
KDELR3O43731 AC011840.4-201ENST00000578471 627 ntBASIC18.36■□□□□ 0.53
KDELR3O43731 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.36■□□□□ 0.53
KDELR3O43731 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.36■□□□□ 0.53
KDELR3O43731 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.36■□□□□ 0.53
KDELR3O43731 AC022898.2-201ENST00000616822 1312 ntBASIC18.36■□□□□ 0.53
KDELR3O43731 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
KDELR3O43731 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KDELR3O43731 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.35■□□□□ 0.53
KDELR3O43731 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KDELR3O43731 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms