Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.09■□□□□ 0.49
PHGDHO43175 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 INGX-201ENST00000359239 846 ntBASIC18.09■□□□□ 0.49
PHGDHO43175 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.09■□□□□ 0.49
PHGDHO43175 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.09■□□□□ 0.49
PHGDHO43175 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 AC112497.1-201ENST00000624824 639 ntBASIC18.09■□□□□ 0.49
PHGDHO43175 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PHGDHO43175 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PHGDHO43175 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.09■□□□□ 0.49
PHGDHO43175 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.09■□□□□ 0.49
PHGDHO43175 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.09■□□□□ 0.49
PHGDHO43175 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.09■□□□□ 0.49
PHGDHO43175 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PHGDHO43175 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PHGDHO43175 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHGDHO43175 AC093010.1-201ENST00000473625 1624 ntBASIC18.09■□□□□ 0.49
PHGDHO43175 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PHGDHO43175 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PHGDHO43175 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PHGDHO43175 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PHGDHO43175 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PHGDHO43175 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHGDHO43175 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHGDHO43175 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PHGDHO43175 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
PHGDHO43175 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHGDHO43175 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.08■□□□□ 0.49
PHGDHO43175 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHGDHO43175 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHGDHO43175 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.08■□□□□ 0.49
PHGDHO43175 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHGDHO43175 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PHGDHO43175 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.08■□□□□ 0.48
PHGDHO43175 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.08■□□□□ 0.48
PHGDHO43175 TSPY15P-201ENST00000457163 923 ntBASIC18.08■□□□□ 0.48
PHGDHO43175 C2orf69P3-201ENST00000565542 1120 ntBASIC18.08■□□□□ 0.48
PHGDHO43175 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 TMEM191A-211ENST00000637163 1067 ntBASIC18.08■□□□□ 0.48
PHGDHO43175 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PHGDHO43175 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.08■□□□□ 0.48
PHGDHO43175 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.08■□□□□ 0.48
PHGDHO43175 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.08■□□□□ 0.48
PHGDHO43175 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.08■□□□□ 0.48
PHGDHO43175 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.08■□□□□ 0.48
PHGDHO43175 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PHGDHO43175 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 AL024508.2-201ENST00000607749 1894 ntBASIC18.07■□□□□ 0.48
PHGDHO43175 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PHGDHO43175 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.07■□□□□ 0.48
PHGDHO43175 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.07■□□□□ 0.48
PHGDHO43175 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PHGDHO43175 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
PHGDHO43175 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 AC104390.1-201ENST00000555663 520 ntBASIC18.07■□□□□ 0.48
PHGDHO43175 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.07■□□□□ 0.48
PHGDHO43175 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.07■□□□□ 0.48
PHGDHO43175 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PHGDHO43175 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.07■□□□□ 0.48
PHGDHO43175 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PHGDHO43175 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHGDHO43175 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms