Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
ABCC4O15439 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
ABCC4O15439 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCC4O15439 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCC4O15439 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.07■■□□□ 1.28
ABCC4O15439 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCC4O15439 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
ABCC4O15439 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 AP003733.1-201ENST00000491725 852 ntBASIC23.07■■□□□ 1.28
ABCC4O15439 KRT18P31-201ENST00000506277 1292 ntBASIC23.07■■□□□ 1.28
ABCC4O15439 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCC4O15439 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCC4O15439 AC091304.2-201ENST00000564639 760 ntBASIC23.07■■□□□ 1.28
ABCC4O15439 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.07■■□□□ 1.28
ABCC4O15439 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.07■■□□□ 1.28
ABCC4O15439 AC024563.2-201ENST00000603282 481 ntBASIC23.07■■□□□ 1.28
ABCC4O15439 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC23.07■■□□□ 1.28
ABCC4O15439 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC23.07■■□□□ 1.28
ABCC4O15439 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
ABCC4O15439 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.06■■□□□ 1.28
ABCC4O15439 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ABCC4O15439 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
ABCC4O15439 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
ABCC4O15439 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ABCC4O15439 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC23.06■■□□□ 1.28
ABCC4O15439 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
ABCC4O15439 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ABCC4O15439 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
ABCC4O15439 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ABCC4O15439 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ABCC4O15439 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.06■■□□□ 1.28
ABCC4O15439 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ABCC4O15439 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ABCC4O15439 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ABCC4O15439 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.06■■□□□ 1.28
ABCC4O15439 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.05■■□□□ 1.28
ABCC4O15439 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
ABCC4O15439 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.05■■□□□ 1.28
ABCC4O15439 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ABCC4O15439 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.05■■□□□ 1.28
ABCC4O15439 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ABCC4O15439 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.05■■□□□ 1.28
ABCC4O15439 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ABCC4O15439 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ABCC4O15439 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC23.04■■□□□ 1.28
ABCC4O15439 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC23.04■■□□□ 1.28
ABCC4O15439 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
ABCC4O15439 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
ABCC4O15439 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 AC090616.6-201ENST00000582640 721 ntBASIC23.04■■□□□ 1.28
ABCC4O15439 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ABCC4O15439 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
ABCC4O15439 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.03■■□□□ 1.28
ABCC4O15439 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
ABCC4O15439 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCC4O15439 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms