Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.79■■□□□ 1.08
SEMA3EO15041 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.79■■□□□ 1.08
SEMA3EO15041 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.79■■□□□ 1.08
SEMA3EO15041 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.79■■□□□ 1.08
SEMA3EO15041 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA3EO15041 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA3EO15041 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA3EO15041 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.78■■□□□ 1.08
SEMA3EO15041 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SEMA3EO15041 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.78■■□□□ 1.08
SEMA3EO15041 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.78■■□□□ 1.08
SEMA3EO15041 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SEMA3EO15041 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.78■■□□□ 1.08
SEMA3EO15041 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
SEMA3EO15041 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SEMA3EO15041 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.78■■□□□ 1.08
SEMA3EO15041 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.78■■□□□ 1.08
SEMA3EO15041 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEMA3EO15041 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SEMA3EO15041 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA3EO15041 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.77■■□□□ 1.08
SEMA3EO15041 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA3EO15041 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA3EO15041 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SEMA3EO15041 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.77■■□□□ 1.08
SEMA3EO15041 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA3EO15041 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.77■■□□□ 1.08
SEMA3EO15041 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.77■■□□□ 1.08
SEMA3EO15041 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.77■■□□□ 1.08
SEMA3EO15041 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA3EO15041 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.77■■□□□ 1.08
SEMA3EO15041 AC064862.7-201ENST00000604520 867 ntBASIC21.77■■□□□ 1.08
SEMA3EO15041 AL355877.3-201ENST00000622820 899 ntBASIC21.77■■□□□ 1.08
SEMA3EO15041 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA3EO15041 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.77■■□□□ 1.08
SEMA3EO15041 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
SEMA3EO15041 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA3EO15041 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SEMA3EO15041 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SEMA3EO15041 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.77■■□□□ 1.08
SEMA3EO15041 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SEMA3EO15041 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.76■■□□□ 1.07
SEMA3EO15041 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SEMA3EO15041 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.76■■□□□ 1.07
SEMA3EO15041 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SEMA3EO15041 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SEMA3EO15041 MRPL3P1-201ENST00000400109 1033 ntBASIC21.76■■□□□ 1.07
SEMA3EO15041 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.76■■□□□ 1.07
SEMA3EO15041 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.76■■□□□ 1.07
SEMA3EO15041 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.76■■□□□ 1.07
SEMA3EO15041 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 AC008608.2-201ENST00000606089 416 ntBASIC21.76■■□□□ 1.07
SEMA3EO15041 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.76■■□□□ 1.07
SEMA3EO15041 TP73-AS1-207ENST00000624167 988 ntBASIC21.76■■□□□ 1.07
SEMA3EO15041 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.76■■□□□ 1.07
SEMA3EO15041 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.76■■□□□ 1.07
SEMA3EO15041 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEMA3EO15041 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.75■■□□□ 1.07
SEMA3EO15041 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SEMA3EO15041 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
SEMA3EO15041 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SEMA3EO15041 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 AC096633.1-201ENST00000422446 749 ntBASIC21.75■■□□□ 1.07
SEMA3EO15041 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.75■■□□□ 1.07
SEMA3EO15041 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms