Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COPEO14579 ESRRAP1-201ENST00000400596 1257 ntBASIC18.19■□□□□ 0.5
COPEO14579 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.19■□□□□ 0.5
COPEO14579 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COPEO14579 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.19■□□□□ 0.5
COPEO14579 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COPEO14579 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.19■□□□□ 0.5
COPEO14579 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
COPEO14579 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
COPEO14579 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
COPEO14579 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COPEO14579 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
COPEO14579 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COPEO14579 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COPEO14579 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COPEO14579 AL163051.1-201ENST00000569214 1512 ntBASIC18.18■□□□□ 0.5
COPEO14579 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COPEO14579 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.18■□□□□ 0.5
COPEO14579 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.18■□□□□ 0.5
COPEO14579 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 AC106820.2-201ENST00000563775 3264 ntBASIC18.18■□□□□ 0.5
COPEO14579 AC099398.1-201ENST00000567919 2776 ntBASIC18.18■□□□□ 0.5
COPEO14579 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.18■□□□□ 0.5
COPEO14579 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 MIR149-201ENST00000384879 89 ntBASIC18.18■□□□□ 0.5
COPEO14579 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.18■□□□□ 0.5
COPEO14579 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.18■□□□□ 0.5
COPEO14579 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.18■□□□□ 0.5
COPEO14579 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.18■□□□□ 0.5
COPEO14579 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COPEO14579 AC073195.1-201ENST00000607241 877 ntBASIC18.18■□□□□ 0.5
COPEO14579 AC093010.1-201ENST00000473625 1624 ntBASIC18.18■□□□□ 0.5
COPEO14579 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.18■□□□□ 0.5
COPEO14579 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COPEO14579 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COPEO14579 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COPEO14579 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COPEO14579 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
COPEO14579 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.17■□□□□ 0.5
COPEO14579 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.17■□□□□ 0.5
COPEO14579 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.17■□□□□ 0.5
COPEO14579 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COPEO14579 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COPEO14579 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COPEO14579 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
COPEO14579 AP000692.2-201ENST00000608391 879 ntBASIC18.17■□□□□ 0.5
COPEO14579 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
COPEO14579 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.17■□□□□ 0.5
COPEO14579 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COPEO14579 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.17■□□□□ 0.5
COPEO14579 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.17■□□□□ 0.5
COPEO14579 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COPEO14579 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COPEO14579 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.16■□□□□ 0.5
COPEO14579 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COPEO14579 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.16■□□□□ 0.5
COPEO14579 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.16■□□□□ 0.5
COPEO14579 AF186192.3-201ENST00000583427 947 ntBASIC18.16■□□□□ 0.5
COPEO14579 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COPEO14579 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.16■□□□□ 0.5
COPEO14579 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
COPEO14579 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.16■□□□□ 0.5
COPEO14579 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COPEO14579 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.16■□□□□ 0.5
COPEO14579 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.16■□□□□ 0.5
COPEO14579 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.16■□□□□ 0.5
COPEO14579 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COPEO14579 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.16■□□□□ 0.5
COPEO14579 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.16■□□□□ 0.5
COPEO14579 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.16■□□□□ 0.5
COPEO14579 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPEO14579 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPEO14579 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.15■□□□□ 0.5
COPEO14579 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms