Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN4O14493 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN4O14493 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN4O14493 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN4O14493 SPDYE13P-201ENST00000445314 798 ntBASIC17.11■□□□□ 0.33
CLDN4O14493 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN4O14493 GPR32P1-201ENST00000601788 811 ntBASIC17.11■□□□□ 0.33
CLDN4O14493 AP000550.4-202ENST00000639755 178 ntBASIC17.11■□□□□ 0.33
CLDN4O14493 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN4O14493 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN4O14493 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN4O14493 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN4O14493 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN4O14493 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CLDN4O14493 IER3-202ENST00000376377 1350 ntBASIC17.11■□□□□ 0.33
CLDN4O14493 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLDN4O14493 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN4O14493 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN4O14493 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN4O14493 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLDN4O14493 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CLDN4O14493 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CLDN4O14493 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN4O14493 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN4O14493 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN4O14493 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLDN4O14493 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN4O14493 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN4O14493 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLDN4O14493 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLDN4O14493 IGHGP-201ENST00000390555 1178 ntBASIC17.1■□□□□ 0.33
CLDN4O14493 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN4O14493 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN4O14493 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CLDN4O14493 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN4O14493 AC011498.5-201ENST00000592027 486 ntBASIC17.1■□□□□ 0.33
CLDN4O14493 AL358472.4-201ENST00000633140 710 ntBASIC17.1■□□□□ 0.33
CLDN4O14493 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN4O14493 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN4O14493 AC104581.1-202ENST00000635932 2618 ntBASIC17.1■□□□□ 0.33
CLDN4O14493 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN4O14493 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN4O14493 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN4O14493 AC009113.1-201ENST00000570267 2443 ntBASIC17.09■□□□□ 0.33
CLDN4O14493 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN4O14493 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN4O14493 AC005332.3-201ENST00000589904 676 ntBASIC17.09■□□□□ 0.33
CLDN4O14493 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN4O14493 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.09■□□□□ 0.33
CLDN4O14493 AC116407.4-201ENST00000623319 1061 ntBASIC17.09■□□□□ 0.33
CLDN4O14493 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CLDN4O14493 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN4O14493 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN4O14493 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN4O14493 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN4O14493 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLDN4O14493 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLDN4O14493 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLDN4O14493 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN4O14493 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLDN4O14493 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN4O14493 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN4O14493 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CLDN4O14493 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN4O14493 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN4O14493 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN4O14493 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN4O14493 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms