Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL21O00585 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCL21O00585 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCL21O00585 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCL21O00585 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
CCL21O00585 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CCL21O00585 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL21O00585 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.96■□□□□ 0.15
CCL21O00585 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL21O00585 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCL21O00585 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.96■□□□□ 0.15
CCL21O00585 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.96■□□□□ 0.15
CCL21O00585 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCL21O00585 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL21O00585 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.96■□□□□ 0.15
CCL21O00585 RNA5SP416-201ENST00000516838 111 ntBASIC15.96■□□□□ 0.15
CCL21O00585 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.96■□□□□ 0.15
CCL21O00585 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.96■□□□□ 0.15
CCL21O00585 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL21O00585 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.96■□□□□ 0.15
CCL21O00585 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.96■□□□□ 0.15
CCL21O00585 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL21O00585 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCL21O00585 AC093484.2-201ENST00000580996 2166 ntBASIC15.96■□□□□ 0.14
CCL21O00585 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.95■□□□□ 0.14
CCL21O00585 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.95■□□□□ 0.14
CCL21O00585 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.95■□□□□ 0.14
CCL21O00585 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.95■□□□□ 0.14
CCL21O00585 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCL21O00585 YBX2P1-201ENST00000394192 760 ntBASIC15.95■□□□□ 0.14
CCL21O00585 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.95■□□□□ 0.14
CCL21O00585 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.95■□□□□ 0.14
CCL21O00585 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.95■□□□□ 0.14
CCL21O00585 GPX1P2-201ENST00000429271 606 ntBASIC15.95■□□□□ 0.14
CCL21O00585 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.95■□□□□ 0.14
CCL21O00585 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCL21O00585 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCL21O00585 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCL21O00585 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.95■□□□□ 0.14
CCL21O00585 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL21O00585 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCL21O00585 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 AL161938.1-201ENST00000569833 2180 ntBASIC15.94■□□□□ 0.14
CCL21O00585 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.94■□□□□ 0.14
CCL21O00585 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.94■□□□□ 0.14
CCL21O00585 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCL21O00585 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL21O00585 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.94■□□□□ 0.14
CCL21O00585 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 AC112482.1-201ENST00000492080 688 ntBASIC15.94■□□□□ 0.14
CCL21O00585 AC112698.1-201ENST00000510299 916 ntBASIC15.94■□□□□ 0.14
CCL21O00585 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.94■□□□□ 0.14
CCL21O00585 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL21O00585 AC107918.4-202ENST00000641623 219 ntBASIC15.94■□□□□ 0.14
CCL21O00585 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.94■□□□□ 0.14
CCL21O00585 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL21O00585 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms