Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC28A1O00337 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC28A1O00337 AC020916.1-201ENST00000587762 1774 ntBASIC17.51■□□□□ 0.39
SLC28A1O00337 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 TSPY14P-201ENST00000303979 915 ntBASIC17.51■□□□□ 0.39
SLC28A1O00337 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SLC28A1O00337 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SLC28A1O00337 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC28A1O00337 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC28A1O00337 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC28A1O00337 AL024508.2-201ENST00000607749 1894 ntBASIC17.51■□□□□ 0.39
SLC28A1O00337 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC28A1O00337 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC28A1O00337 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC28A1O00337 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC28A1O00337 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC28A1O00337 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC28A1O00337 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SLC28A1O00337 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC28A1O00337 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC28A1O00337 EGLN1P1-201ENST00000531623 762 ntBASIC17.5■□□□□ 0.39
SLC28A1O00337 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.5■□□□□ 0.39
SLC28A1O00337 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC28A1O00337 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC28A1O00337 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SLC28A1O00337 AC010240.3-201ENST00000607688 395 ntBASIC17.5■□□□□ 0.39
SLC28A1O00337 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC28A1O00337 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC28A1O00337 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC28A1O00337 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC28A1O00337 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC28A1O00337 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC28A1O00337 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SLC28A1O00337 AC006116.8-202ENST00000587620 1550 ntBASIC17.49■□□□□ 0.39
SLC28A1O00337 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC28A1O00337 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC28A1O00337 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SLC28A1O00337 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC28A1O00337 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 AC128688.1-201ENST00000487626 519 ntBASIC17.49■□□□□ 0.39
SLC28A1O00337 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC28A1O00337 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC28A1O00337 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC28A1O00337 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC28A1O00337 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC28A1O00337 AP006294.2-201ENST00000641667 209 ntBASIC17.49■□□□□ 0.39
SLC28A1O00337 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC28A1O00337 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLC28A1O00337 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC28A1O00337 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC28A1O00337 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC28A1O00337 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
SLC28A1O00337 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC28A1O00337 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SLC28A1O00337 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC28A1O00337 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms