Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 KRT18P55-202ENST00000578578 1546 ntBASIC16.83■□□□□ 0.28
TNFRSF11BO00300 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 AC009102.3-201ENST00000623118 1491 ntBASIC16.83■□□□□ 0.28
TNFRSF11BO00300 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 AL163051.1-201ENST00000569214 1512 ntBASIC16.82■□□□□ 0.28
TNFRSF11BO00300 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 MIR935-201ENST00000401179 91 ntBASIC16.82■□□□□ 0.28
TNFRSF11BO00300 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 B3GAT3P1-201ENST00000471720 806 ntBASIC16.82■□□□□ 0.28
TNFRSF11BO00300 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 AC106820.2-201ENST00000563775 3264 ntBASIC16.82■□□□□ 0.28
TNFRSF11BO00300 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFRSF11BO00300 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 MIR149-201ENST00000384879 89 ntBASIC16.81■□□□□ 0.28
TNFRSF11BO00300 ESRRAP1-201ENST00000400596 1257 ntBASIC16.81■□□□□ 0.28
TNFRSF11BO00300 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 AP000692.2-201ENST00000608391 879 ntBASIC16.81■□□□□ 0.28
TNFRSF11BO00300 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 AC093010.1-201ENST00000473625 1624 ntBASIC16.81■□□□□ 0.28
TNFRSF11BO00300 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF11BO00300 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 AC073195.1-201ENST00000607241 877 ntBASIC16.8■□□□□ 0.28
TNFRSF11BO00300 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF11BO00300 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms