Protein–RNA interactions for Protein: A6NE21

FAM90A18P, Putative protein FAM90A18P/FAM90A19P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A18PA6NE21 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 EGLN1P1-201ENST00000531623 762 ntBASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 AC022898.2-201ENST00000616822 1312 ntBASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
FAM90A18PA6NE21 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 AC128688.1-201ENST00000487626 519 ntBASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
FAM90A18PA6NE21 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 MMP23A-201ENST00000234610 1017 ntBASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM90A18PA6NE21 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM90A18PA6NE21 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.27■□□□□ 0.04
FAM90A18PA6NE21 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM90A18PA6NE21 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
FAM90A18PA6NE21 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.27■□□□□ 0.04
FAM90A18PA6NE21 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FAM90A18PA6NE21 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FAM90A18PA6NE21 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FAM90A18PA6NE21 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM90A18PA6NE21 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms