Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 AC009065.1-201ENST00000564055 1225 ntBASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM49BA6NDI0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 AC087499.1-201ENST00000418141 1075 ntBASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 ECEL1P3-201ENST00000427961 737 ntBASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 AC006116.8-202ENST00000587620 1550 ntBASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM49BA6NDI0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM49BA6NDI0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM49BA6NDI0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM49BA6NDI0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.02■□□□□ 0.79
TRIM49BA6NDI0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TRIM49BA6NDI0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM49BA6NDI0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM49BA6NDI0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 AC100803.2-201ENST00000562459 1963 ntBASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 MIR3917-201ENST00000580971 93 ntBASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 AL157888.1-201ENST00000631930 593 ntBASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM49BA6NDI0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM49BA6NDI0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
TRIM49BA6NDI0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms