Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 MTDHP3-201ENST00000594186 672 ntBASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 AP005117.1-201ENST00000584346 1413 ntBASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC144AA2RUR9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 AC073648.2-201ENST00000510116 352 ntBASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC144AA2RUR9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 AC096633.1-201ENST00000422446 749 ntBASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 AL671883.3-201ENST00000603274 991 ntBASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC144AA2RUR9 WIZP1-201ENST00000531444 2299 ntBASIC25.95■■□□□ 1.75
CCDC144AA2RUR9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
CCDC144AA2RUR9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
CCDC144AA2RUR9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CCDC144AA2RUR9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CCDC144AA2RUR9 AC243591.1-201ENST00000452967 1364 ntBASIC25.95■■□□□ 1.75
CCDC144AA2RUR9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 FAM220CP-201ENST00000395253 831 ntBASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 SART3-203ENST00000546611 1184 ntBASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 BX323043.1-201ENST00000641006 1765 ntBASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCDC144AA2RUR9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC25.94■■□□□ 1.74
CCDC144AA2RUR9 AC010460.3-201ENST00000511359 1579 ntBASIC25.94■■□□□ 1.74
CCDC144AA2RUR9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCDC144AA2RUR9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCDC144AA2RUR9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
CCDC144AA2RUR9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
CCDC144AA2RUR9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms