Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC189A1A4V9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC189A1A4V9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.21■□□□□ 0.5
CCDC189A1A4V9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 AC097488.1-201ENST00000507834 756 ntBASIC18.2■□□□□ 0.5
CCDC189A1A4V9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 SLC25A1P4-201ENST00000567977 778 ntBASIC18.2■□□□□ 0.5
CCDC189A1A4V9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 AL049637.2-201ENST00000641778 930 ntBASIC18.2■□□□□ 0.5
CCDC189A1A4V9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC189A1A4V9 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.2■□□□□ 0.5
CCDC189A1A4V9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 TSPY20P-201ENST00000450910 630 ntBASIC18.19■□□□□ 0.5
CCDC189A1A4V9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 MIR3180-5-201ENST00000583743 153 ntBASIC18.19■□□□□ 0.5
CCDC189A1A4V9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 TCAF2P1-201ENST00000291129 2421 ntBASIC18.19■□□□□ 0.5
CCDC189A1A4V9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC189A1A4V9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 HOXB1-202ENST00000577092 1414 ntBASIC18.18■□□□□ 0.5
CCDC189A1A4V9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 AC113410.3-201ENST00000623366 203 ntBASIC18.18■□□□□ 0.5
CCDC189A1A4V9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms