Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 AC009102.3-201ENST00000623118 1491 ntBASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 AP000523.1-201ENST00000398242 1049 ntBASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 LIN28AP1-201ENST00000429574 405 ntBASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRGV4A0A0C4DH28 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 ABALON-201ENST00000629058 1903 ntBASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 BICD1-207ENST00000551848 1962 ntBASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 AL163051.1-201ENST00000569214 1512 ntBASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 MIR149-201ENST00000384879 89 ntBASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 ATP5G1P1-201ENST00000448724 379 ntBASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 AC007613.1-201ENST00000572811 2597 ntBASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRGV4A0A0C4DH28 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV4A0A0C4DH28 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRGV4A0A0C4DH28 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV4A0A0C4DH28 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV4A0A0C4DH28 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRGV4A0A0C4DH28 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV4A0A0C4DH28 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRGV4A0A0C4DH28 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV4A0A0C4DH28 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV4A0A0C4DH28 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV4A0A0C4DH28 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms