Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV30A0A087WSZ9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 AC036111.1-201ENST00000533973 1582 ntBASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 AC098590.1-201ENST00000468126 897 ntBASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 AP003071.4-201ENST00000562276 1284 ntBASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV30A0A087WSZ9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 ESPNP-201ENST00000270691 2015 ntBASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 KRT18P23-201ENST00000435622 1283 ntBASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 BX088651.1-201ENST00000540551 451 ntBASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 WWOX-216ENST00000569818 525 ntBASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 MIR3180-4-201ENST00000582223 153 ntBASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 MIR4785-201ENST00000585005 73 ntBASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 AC008764.6-201ENST00000595909 2069 ntBASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms