Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AC022211.2-201ENST00000585075 2527 ntBASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 AL109659.2-201ENST00000606809 1674 ntBASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 AP000593.1-201ENST00000393668 712 ntBASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV18A0A075B6X5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.64■□□□□ 0.1
TRAV18A0A075B6X5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 AC099343.3-201ENST00000605834 2503 ntBASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRAV18A0A075B6X5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 AC098934.4-201ENST00000564127 592 ntBASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV18A0A075B6X5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms