Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CAPN6Q9Y6Q1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN6Q9Y6Q1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN6Q9Y6Q1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN6Q9Y6Q1 AC084018.2-201ENST00000613093 2607 ntBASIC19.27■□□□□ 0.68
CAPN6Q9Y6Q1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN6Q9Y6Q1 AD000864.1-201ENST00000624076 2295 ntBASIC19.27■□□□□ 0.68
CAPN6Q9Y6Q1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN6Q9Y6Q1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN6Q9Y6Q1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN6Q9Y6Q1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN6Q9Y6Q1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN6Q9Y6Q1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN6Q9Y6Q1 AL024508.2-201ENST00000607749 1894 ntBASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 AL359736.2-201ENST00000621992 437 ntBASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 AC100803.2-201ENST00000562459 1963 ntBASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CAPN6Q9Y6Q1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 AL023806.1-201ENST00000603994 1649 ntBASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN6Q9Y6Q1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 KRT18P23-201ENST00000435622 1283 ntBASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 AC097488.1-201ENST00000507834 756 ntBASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 NUDT16P1-203ENST00000513809 620 ntBASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 LINC00602-201ENST00000629776 2065 ntBASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN6Q9Y6Q1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms