Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 KRT8P3-201ENST00000519669 1449 ntBASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGB1Q9Y5G3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 MYLKP1-201ENST00000509077 1580 ntBASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGB1Q9Y5G3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 PRSS44-201ENST00000515154 1146 ntBASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGB1Q9Y5G3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGB1Q9Y5G3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.64■□□□□ 0.26
PCDHGB1Q9Y5G3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
PCDHGB1Q9Y5G3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGB1Q9Y5G3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PCDHGB1Q9Y5G3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGB1Q9Y5G3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms