Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 AC092437.1-201ENST00000624794 1048 ntBASIC17.21■□□□□ 0.35
AP4S1Q9Y587 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4S1Q9Y587 AC011270.2-201ENST00000624293 2550 ntBASIC17.21■□□□□ 0.35
AP4S1Q9Y587 AC046158.3-201ENST00000624947 2558 ntBASIC17.21■□□□□ 0.35
AP4S1Q9Y587 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
AP4S1Q9Y587 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.21■□□□□ 0.34
AP4S1Q9Y587 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.2■□□□□ 0.34
AP4S1Q9Y587 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.2■□□□□ 0.34
AP4S1Q9Y587 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 PRSS44-201ENST00000515154 1146 ntBASIC17.19■□□□□ 0.34
AP4S1Q9Y587 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 HLA-B-256ENST00000639848 1089 ntBASIC17.19■□□□□ 0.34
AP4S1Q9Y587 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP4S1Q9Y587 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 AL355312.1-201ENST00000407115 2176 ntBASIC17.18■□□□□ 0.34
AP4S1Q9Y587 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 AP000593.1-201ENST00000393668 712 ntBASIC17.18■□□□□ 0.34
AP4S1Q9Y587 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4S1Q9Y587 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms