Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 LINC01126-201ENST00000623515 1646 ntBASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 AC139713.2-201ENST00000641328 2723 ntBASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 KRT18P29-201ENST00000397031 1267 ntBASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 RPS2P55-201ENST00000397318 883 ntBASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 AC107956.1-201ENST00000494359 873 ntBASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 REXO1L12P-201ENST00000622156 912 ntBASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRAF6Q9Y4K3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 AL645608.8-201ENST00000606034 2086 ntBASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAF6Q9Y4K3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.71■□□□□ 0.42
TRAF6Q9Y4K3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRAF6Q9Y4K3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAF6Q9Y4K3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAF6Q9Y4K3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAF6Q9Y4K3 AC012313.1-201ENST00000593393 3059 ntBASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 AP001412.1-201ENST00000608405 714 ntBASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 AC113410.3-201ENST00000623366 203 ntBASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF6Q9Y4K3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF6Q9Y4K3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms