Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RCL1Q9Y2P8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 AC060766.5-201ENST00000590539 871 ntBASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 LINC00602-201ENST00000629776 2065 ntBASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RCL1Q9Y2P8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.87□□□□□ -0.03
RCL1Q9Y2P8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms