Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 AC012618.2-201ENST00000428058 849 ntBASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 KRT18P23-201ENST00000435622 1283 ntBASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 AL049637.2-201ENST00000641778 930 ntBASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP2BQ9UQN3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 AL355355.2-201ENST00000442321 338 ntBASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 AC233702.5-201ENST00000584107 538 ntBASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHMP2BQ9UQN3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP2BQ9UQN3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP2BQ9UQN3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP2BQ9UQN3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.52■□□□□ 0.55
CHMP2BQ9UQN3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
CHMP2BQ9UQN3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP2BQ9UQN3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP2BQ9UQN3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.52■□□□□ 0.55
CHMP2BQ9UQN3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHMP2BQ9UQN3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 GCSHP5-201ENST00000443090 522 ntBASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 UBE2SP1-201ENST00000450587 669 ntBASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 AC026471.5-201ENST00000615068 467 ntBASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHMP2BQ9UQN3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 HOXB1-202ENST00000577092 1414 ntBASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 AP003041.3-201ENST00000527151 707 ntBASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 AP001412.1-201ENST00000608405 714 ntBASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHMP2BQ9UQN3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms