Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SMC3Q9UQE7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMC3Q9UQE7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMC3Q9UQE7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SMC3Q9UQE7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 AC093010.1-201ENST00000473625 1624 ntBASIC21.37■■□□□ 1.01
SMC3Q9UQE7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SMC3Q9UQE7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SMC3Q9UQE7 AC020916.1-201ENST00000587762 1774 ntBASIC21.36■■□□□ 1.01
SMC3Q9UQE7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 CCR12P-201ENST00000446203 998 ntBASIC21.35■■□□□ 1.01
SMC3Q9UQE7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 AP000525.1-201ENST00000608286 694 ntBASIC21.35■■□□□ 1.01
SMC3Q9UQE7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 AC092338.2-201ENST00000568827 1415 ntBASIC21.35■■□□□ 1.01
SMC3Q9UQE7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SMC3Q9UQE7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 TSPY7P-201ENST00000431358 1114 ntBASIC21.34■■□□□ 1.01
SMC3Q9UQE7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 BX088651.1-201ENST00000540551 451 ntBASIC21.34■■□□□ 1.01
SMC3Q9UQE7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 AC009065.1-201ENST00000564055 1225 ntBASIC21.34■■□□□ 1.01
SMC3Q9UQE7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMC3Q9UQE7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SMC3Q9UQE7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.33■■□□□ 1.01
SMC3Q9UQE7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.33■■□□□ 1.01
SMC3Q9UQE7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SMC3Q9UQE7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMC3Q9UQE7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SMC3Q9UQE7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMC3Q9UQE7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms