Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.88■□□□□ 0.61
AP4E1Q9UPM8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.87■□□□□ 0.61
AP4E1Q9UPM8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 FLJ13224-201ENST00000313737 1514 ntBASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 HLA-F-220ENST00000434407 884 ntBASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 AC092597.1-201ENST00000487352 616 ntBASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 AC063952.2-201ENST00000498792 1227 ntBASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.86■□□□□ 0.61
AP4E1Q9UPM8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 DUX4L26-201ENST00000489078 1255 ntBASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 KRT18P21-201ENST00000515767 1272 ntBASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 AC024563.2-201ENST00000603282 481 ntBASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
AP4E1Q9UPM8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms