Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 AL357033.4-201ENST00000617703 1807 ntBASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 AC108860.2-201ENST00000562760 2183 ntBASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 SIRPAP1-201ENST00000448467 1770 ntBASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 MIR4651-201ENST00000582622 73 ntBASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 MIR6786-201ENST00000616843 113 ntBASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 FSCN1P1-201ENST00000568912 1481 ntBASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 RCC2P3-201ENST00000418112 1537 ntBASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGB4Q9UN71 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGB4Q9UN71 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGB4Q9UN71 AL499627.1-201ENST00000569373 2188 ntBASIC17.64■□□□□ 0.42
PCDHGB4Q9UN71 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGB4Q9UN71 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGB4Q9UN71 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGB4Q9UN71 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGB4Q9UN71 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 KRT18P29-201ENST00000397031 1267 ntBASIC17.64■□□□□ 0.41
PCDHGB4Q9UN71 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms