Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SALL4Q9UJQ4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.33■□□□□ 0.69
SALL4Q9UJQ4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.33■□□□□ 0.69
SALL4Q9UJQ4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.69
SALL4Q9UJQ4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.33■□□□□ 0.69
SALL4Q9UJQ4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SALL4Q9UJQ4 UNC93B2-201ENST00000285383 730 ntBASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 AL023803.3-201ENST00000615559 522 ntBASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 SIRPAP1-201ENST00000448467 1770 ntBASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SALL4Q9UJQ4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 RBM17P1-201ENST00000453646 1190 ntBASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.32■□□□□ 0.68
SALL4Q9UJQ4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 RCN1P1-201ENST00000400413 996 ntBASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 CR769767.2-201ENST00000622735 460 ntBASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SALL4Q9UJQ4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms