Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GPR32P1-201ENST00000601788 811 ntBASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDAC6Q9UBN7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 IGHGP-201ENST00000390555 1178 ntBASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 AC104819.1-201ENST00000504587 486 ntBASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 KRT18P31-201ENST00000506277 1292 ntBASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.54■□□□□ 0.88
HDAC6Q9UBN7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 AC024563.2-201ENST00000603282 481 ntBASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 AL031008.1-201ENST00000619963 541 ntBASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 AC233702.3-201ENST00000578656 1387 ntBASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HDAC6Q9UBN7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 PCDHB18P-201ENST00000524813 2368 ntBASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 AC009078.2-202ENST00000463353 338 ntBASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 AC074051.2-201ENST00000565115 352 ntBASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HDAC6Q9UBN7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HDAC6Q9UBN7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HDAC6Q9UBN7 LINC00167-201ENST00000530583 1419 ntBASIC20.52■□□□□ 0.87
HDAC6Q9UBN7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HDAC6Q9UBN7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HDAC6Q9UBN7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
HDAC6Q9UBN7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HDAC6Q9UBN7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.51■□□□□ 0.87
HDAC6Q9UBN7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HDAC6Q9UBN7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
HDAC6Q9UBN7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HDAC6Q9UBN7 AC079781.3-201ENST00000449110 356 ntBASIC20.51■□□□□ 0.87
HDAC6Q9UBN7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.51■□□□□ 0.87
HDAC6Q9UBN7 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.51■□□□□ 0.87
HDAC6Q9UBN7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HDAC6Q9UBN7 AC104692.2-201ENST00000603054 253 ntBASIC20.51■□□□□ 0.87
HDAC6Q9UBN7 AC138894.3-201ENST00000603787 634 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms