Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF7Q9UBF6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 AC113404.2-201ENST00000507884 177 ntBASIC15.33■□□□□ 0.04
RNF7Q9UBF6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF7Q9UBF6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 AC135776.1-201ENST00000319817 2481 ntBASIC15.32■□□□□ 0.04
RNF7Q9UBF6 AC093677.2-201ENST00000600169 1863 ntBASIC15.32■□□□□ 0.04
RNF7Q9UBF6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 SPDYE13P-201ENST00000445314 798 ntBASIC15.32■□□□□ 0.04
RNF7Q9UBF6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF7Q9UBF6 PHGDH-209ENST00000641074 1780 ntBASIC15.31■□□□□ 0.04
RNF7Q9UBF6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 FAM86EP-206ENST00000510506 987 ntBASIC15.31■□□□□ 0.04
RNF7Q9UBF6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF7Q9UBF6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms