Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RLIMQ9NVW2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.96■□□□□ 0.3
RLIMQ9NVW2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RLIMQ9NVW2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
RLIMQ9NVW2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RLIMQ9NVW2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RLIMQ9NVW2 SDHAP2-201ENST00000455183 2001 ntBASIC16.96■□□□□ 0.3
RLIMQ9NVW2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
RLIMQ9NVW2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.3
RLIMQ9NVW2 AL163051.1-201ENST00000569214 1512 ntBASIC16.96■□□□□ 0.3
RLIMQ9NVW2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RLIMQ9NVW2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 KRT18P23-201ENST00000435622 1283 ntBASIC16.95■□□□□ 0.3
RLIMQ9NVW2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 AL096828.2-201ENST00000567259 1965 ntBASIC16.95■□□□□ 0.3
RLIMQ9NVW2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RLIMQ9NVW2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 AL645608.8-201ENST00000606034 2086 ntBASIC16.94■□□□□ 0.3
RLIMQ9NVW2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 FLJ13224-201ENST00000313737 1514 ntBASIC16.94■□□□□ 0.3
RLIMQ9NVW2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 AC099398.1-201ENST00000567919 2776 ntBASIC16.94■□□□□ 0.3
RLIMQ9NVW2 GMCL1P1-201ENST00000463439 1581 ntBASIC16.94■□□□□ 0.3
RLIMQ9NVW2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RLIMQ9NVW2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 TSPY14P-201ENST00000303979 915 ntBASIC16.93■□□□□ 0.3
RLIMQ9NVW2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 WWOX-216ENST00000569818 525 ntBASIC16.93■□□□□ 0.3
RLIMQ9NVW2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RLIMQ9NVW2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms