Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 AL359075.1-203ENST00000462729 1002 ntBASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 KRT18P21-201ENST00000515767 1272 ntBASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 AC024563.2-201ENST00000603282 481 ntBASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 AC093010.1-201ENST00000473625 1624 ntBASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 KRT89P-201ENST00000620027 1478 ntBASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
UBQLN4Q9NRR5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 HLA-F-220ENST00000434407 884 ntBASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 DUX4L26-201ENST00000489078 1255 ntBASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 AC022616.7-201ENST00000525383 220 ntBASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN4Q9NRR5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 FLJ13224-201ENST00000313737 1514 ntBASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 AC138028.4-201ENST00000564984 1845 ntBASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 KRT18P38-201ENST00000449496 1282 ntBASIC16.71■□□□□ 0.27
UBQLN4Q9NRR5 AC092597.1-201ENST00000487352 616 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms