Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 AC145285.3-201ENST00000564603 959 ntBASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 AC140113.2-201ENST00000604370 208 ntBASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM7Q9NR12 AC022898.2-201ENST00000616822 1312 ntBASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 LINC01126-201ENST00000623515 1646 ntBASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 UPF3AP3-201ENST00000420996 769 ntBASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 AC098831.1-202ENST00000438821 336 ntBASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 AC027601.4-201ENST00000611259 610 ntBASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM7Q9NR12 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.27■□□□□ 0.83
PDLIM7Q9NR12 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDLIM7Q9NR12 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDLIM7Q9NR12 AC104109.2-201ENST00000602919 1418 ntBASIC20.27■□□□□ 0.83
PDLIM7Q9NR12 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
PDLIM7Q9NR12 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 RBM17P3-201ENST00000417687 1192 ntBASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 AC010327.4-202ENST00000591484 748 ntBASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 AP001160.2-201ENST00000596071 487 ntBASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 AC087289.5-201ENST00000586076 3175 ntBASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM7Q9NR12 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 RCN1P2-201ENST00000398357 915 ntBASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 IGHV3-22-201ENST00000520721 359 ntBASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 AC027796.2-201ENST00000575326 344 ntBASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 MTDHP3-201ENST00000594186 672 ntBASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 AL356488.2-201ENST00000602755 427 ntBASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.25■□□□□ 0.83
PDLIM7Q9NR12 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDLIM7Q9NR12 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms