Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 AC141257.4-201ENST00000634557 245 ntBASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 AC136944.6-201ENST00000634818 245 ntBASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLK4Q9HAZ1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLK4Q9HAZ1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.71■□□□□ 0.42
CLK4Q9HAZ1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CLK4Q9HAZ1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CLK4Q9HAZ1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 AC126763.1-201ENST00000552015 2118 ntBASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 AC073592.3-201ENST00000625118 1834 ntBASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CLK4Q9HAZ1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 AC005521.1-201ENST00000393351 872 ntBASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 KRT18P41-201ENST00000518924 1277 ntBASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 KRT8P45-201ENST00000414328 1447 ntBASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 HOXB1-202ENST00000577092 1414 ntBASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 AL162741.1-201ENST00000565563 1558 ntBASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 ANO7L1-203ENST00000602586 1720 ntBASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLK4Q9HAZ1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLK4Q9HAZ1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLK4Q9HAZ1 AC124067.4-201ENST00000519691 2379 ntBASIC17.68■□□□□ 0.42
CLK4Q9HAZ1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.68■□□□□ 0.42
CLK4Q9HAZ1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms