Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 AC139887.3-201ENST00000568585 713 ntBASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP3Q9H6T3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 ABCD1P5-201ENST00000445663 754 ntBASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP3Q9H6T3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 GMCL1P1-201ENST00000463439 1581 ntBASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 SART3-203ENST00000546611 1184 ntBASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP3Q9H6T3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 AC021087.4-201ENST00000563761 564 ntBASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 AC106730.1-201ENST00000566722 1090 ntBASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPAP3Q9H6T3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 AC132938.6-201ENST00000623828 1655 ntBASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 RPL13AP23-201ENST00000480739 586 ntBASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms