Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.4■□□□□ 0.38
PIF1Q9H611 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.4■□□□□ 0.38
PIF1Q9H611 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.4■□□□□ 0.38
PIF1Q9H611 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PIF1Q9H611 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.4■□□□□ 0.38
PIF1Q9H611 AC011298.2-201ENST00000617989 482 ntBASIC17.4■□□□□ 0.38
PIF1Q9H611 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.4■□□□□ 0.38
PIF1Q9H611 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PIF1Q9H611 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PIF1Q9H611 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PIF1Q9H611 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PIF1Q9H611 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PIF1Q9H611 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PIF1Q9H611 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.39■□□□□ 0.38
PIF1Q9H611 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PIF1Q9H611 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PIF1Q9H611 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PIF1Q9H611 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.39■□□□□ 0.37
PIF1Q9H611 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 FLJ13224-201ENST00000313737 1514 ntBASIC17.39■□□□□ 0.37
PIF1Q9H611 PRORSD1P-201ENST00000295112 541 ntBASIC17.39■□□□□ 0.37
PIF1Q9H611 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 SLC25A6P5-201ENST00000435663 894 ntBASIC17.39■□□□□ 0.37
PIF1Q9H611 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.39■□□□□ 0.37
PIF1Q9H611 C1QBPP2-201ENST00000528754 825 ntBASIC17.39■□□□□ 0.37
PIF1Q9H611 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.39■□□□□ 0.37
PIF1Q9H611 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 CR392000.1-201ENST00000624770 1228 ntBASIC17.39■□□□□ 0.37
PIF1Q9H611 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.39■□□□□ 0.37
PIF1Q9H611 AL645608.8-201ENST00000606034 2086 ntBASIC17.39■□□□□ 0.37
PIF1Q9H611 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.39■□□□□ 0.37
PIF1Q9H611 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PIF1Q9H611 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.39■□□□□ 0.37
PIF1Q9H611 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.39■□□□□ 0.37
PIF1Q9H611 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PIF1Q9H611 PP12613-201ENST00000424958 2230 ntBASIC17.39■□□□□ 0.37
PIF1Q9H611 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PIF1Q9H611 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 PHGDH-209ENST00000641074 1780 ntBASIC17.38■□□□□ 0.37
PIF1Q9H611 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PIF1Q9H611 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PIF1Q9H611 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.38■□□□□ 0.37
PIF1Q9H611 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PIF1Q9H611 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.38■□□□□ 0.37
PIF1Q9H611 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.38■□□□□ 0.37
PIF1Q9H611 CKBP1-201ENST00000565489 1086 ntBASIC17.38■□□□□ 0.37
PIF1Q9H611 AC008622.2-201ENST00000617006 1229 ntBASIC17.38■□□□□ 0.37
PIF1Q9H611 AL359736.2-201ENST00000621992 437 ntBASIC17.38■□□□□ 0.37
PIF1Q9H611 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.38■□□□□ 0.37
PIF1Q9H611 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.38■□□□□ 0.37
PIF1Q9H611 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PIF1Q9H611 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PIF1Q9H611 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PIF1Q9H611 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.37■□□□□ 0.37
PIF1Q9H611 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PIF1Q9H611 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PIF1Q9H611 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.37■□□□□ 0.37
PIF1Q9H611 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.37■□□□□ 0.37
PIF1Q9H611 GMCL1P1-201ENST00000463439 1581 ntBASIC17.37■□□□□ 0.37
PIF1Q9H611 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PIF1Q9H611 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PIF1Q9H611 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms